Thanks for your feedback grossgary,
I had driven it in the rain once maybe twice (car was a month old 1700 miles when I first noticed the rust) I dont see any rust on the outside or underneath the car. The edges of the holes in the metal were the plugs go is also rust free. If you look closely at the pictures you can see areas were the paint has a wrinkled appearance. It looks to be separating from the metal or primer in an odd manner. The areas were it is rusting has a different more common look, blistered round bumps with rust erupting out of them. The drivers side only has one small blister and no wrinkled areas. Not sure what to make of it. Had a friend who I used to work with (I've been a mechanic for over 20 years) who specializes in auto body. He said it was bad paint, improper application or both.
I have contacted both Subaru and my dealer multiple times. I have yet to be given an explanation of why it rusted or what is to be done. This is the third warranty issue I've had in the first month of ownership. The first being speaker grilles that would pop out of the dash and vibrate. The second being the cigarette lighter recepticle pulled out of the dash when i went to remove my phone charger. It took three trips to the dealer to get the first two fixed, not looking forward to what lies ahead.